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    LOC4336727 subtilisin-like protease SBT1.3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336727, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336727
    Gene description
    subtilisin-like protease SBT1.3
    Locus tag
    OSNPB_040573300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336727 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (29384953..29387655, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (28878774..28882308, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene SPX domain-containing membrane protein OsI_17046 Neighboring gene protein HOTHEAD Neighboring gene copper chaperone for superoxide dismutase, chloroplastic-like Neighboring gene cytochrome P450 704C1 Neighboring gene xyloglucan galactosyltransferase XLT2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    subtilisin-like protease SBT1.3
    Names
    Os04g0573300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      29384953..29387655 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015780022.3 → XP_015635508.1  subtilisin-like protease SBT1.3

      UniProtKB/TrEMBL
      A3AWL2, Q7XTY8
      Conserved Domains (4) summary
      cd04852
      Location:115 → 592
      Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3
      cd02120
      Location:357 → 487
      PA_subtilisin_like; PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from ...
      pfam00082
      Location:143 → 591
      Peptidase_S8; Subtilase family
      pfam05922
      Location:33 → 118
      Inhibitor_I9; Peptidase inhibitor I9
    Nucleotide Protein
    Heading Accession and Version

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