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    rbbp9 retinoblastoma binding protein 9 [ Danio rerio (zebrafish) ]

    Gene ID: 553083, updated on 9-Dec-2024

    Summary

    Official Symbol
    rbbp9provided by ZNC
    Official Full Name
    retinoblastoma binding protein 9provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050208-692
    See related
    Ensembl:ENSDARG00000040713 AllianceGenome:ZFIN:ZDB-GENE-050208-692
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:7247963; zgc:152807; si:ch211-258l4.7
    Summary
    Predicted to enable hydrolase activity. Orthologous to human RBBP9 (RB binding protein 9, serine hydrolase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See rbbp9 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38946439..38951354, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38959694..38964609, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 5 Neighboring gene nuclear cap binding protein subunit 2 Neighboring gene sirtuin 7 Neighboring gene Rho guanine nucleotide exchange factor (GEF) 3 Neighboring gene transcription activation suppressor a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001042748.1NP_001036213.1  serine hydrolase RBBP9

      See identical proteins and their annotated locations for NP_001036213.1

      Status: PROVISIONAL

      Source sequence(s)
      AL953867
      UniProtKB/TrEMBL
      A0A8N7XJ88, F1Q4W1, Q1MT41
      Related
      ENSDARP00000095196.4, ENSDART00000104423.6
      Conserved Domains (1) summary
      cl21494
      Location:3183
      Abhydrolase; alpha/beta hydrolases

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      38946439..38951354 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)