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    LOC100149007 zinc finger protein 319 [ Danio rerio (zebrafish) ]

    Gene ID: 100149007, updated on 12-Sep-2024

    Summary

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    Gene symbol
    LOC100149007
    Gene description
    zinc finger protein 319
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See LOC100149007 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (56768353..56773561, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (56466999..56472281, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene kiaa0895l Neighboring gene casein kinase 2, alpha prime polypeptide a Neighboring gene junctophilin 3a Neighboring gene SUMO peptidase family member, NEDD8 specific

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    zinc finger protein 319

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      56768353..56773561 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001923303.8 → XP_001923338.2  zinc finger protein 319

      UniProtKB/TrEMBL
      A0A8M1QKV7
      Conserved Domains (3) summary
      COG5048
      Location:100 → 485
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:212 → 232
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:512 → 537
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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