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    zmynd12 zinc finger, MYND-type containing 12 [ Danio rerio (zebrafish) ]

    Gene ID: 492338, updated on 2-Nov-2024

    Summary

    Official Symbol
    zmynd12provided by ZNC
    Official Full Name
    zinc finger, MYND-type containing 12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041114-133
    See related
    Ensembl:ENSDARG00000017055 AllianceGenome:ZFIN:ZDB-GENE-041114-133
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zymnd12; zgc:92280; CH73-261F6.1
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human ZMYND12 (zinc finger MYND-type containing 12). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See zmynd12 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (26902844..26918508, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (26883705..26899369, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene PR domain containing 2, with ZNF domain a Neighboring gene ribosomal modification protein rimK-like family member A Neighboring gene solute carrier family 16 member 1b Neighboring gene transfer RNA proline (anticodon UGG)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    zinc finger MYND domain-containing protein 12

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007304.1NP_001007305.1  zinc finger MYND domain-containing protein 12

      See identical proteins and their annotated locations for NP_001007305.1

      Status: PROVISIONAL

      Source sequence(s)
      BC085655
      UniProtKB/TrEMBL
      A0A8M1N389, Q5U390
      Related
      ENSDARP00000021244.9, ENSDART00000008742.10
      Conserved Domains (2) summary
      pfam01753
      Location:1855
      zf-MYND; MYND finger
      pfam13424
      Location:168240
      TPR_12; Tetratricopeptide repeat

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      26902844..26918508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394726.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      516469..531286 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)