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    gpm6ba glycoprotein M6Ba [ Danio rerio (zebrafish) ]

    Gene ID: 368225, updated on 9-Dec-2024

    Summary

    Official Symbol
    gpm6baprovided by ZNC
    Official Full Name
    glycoprotein M6Baprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030710-9
    See related
    Ensembl:ENSDARG00000005739 AllianceGenome:ZFIN:ZDB-GENE-030710-9
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:136505
    Summary
    Predicted to be a structural constituent of myelin sheath. Predicted to be involved in axon development and central nervous system myelination. Predicted to be located in membrane. Predicted to be active in myelin sheath and plasma membrane. Is expressed in nervous system. Orthologous to human GPM6B (glycoprotein M6B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See gpm6ba in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (28959723..29045423, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (28155891..28241591, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene PWP2 small subunit processome component Neighboring gene uncharacterized LOC137490016 Neighboring gene uncharacterized LOC137495507 Neighboring gene gem (nuclear organelle) associated protein 8 Neighboring gene cystathionine beta-synthase a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC136505

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables structural constituent of myelin sheath IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in axon development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in central nervous system myelination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in myelin sheath IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    glycoprotein M6Ba
    Names
    DMgamma1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203427.2NP_982251.1  glycoprotein M6Ba

      See identical proteins and their annotated locations for NP_982251.1

      Status: VALIDATED

      Source sequence(s)
      BX248514, CU570895
      UniProtKB/TrEMBL
      A0A2R8Q5Y1, F6NZC9, Q8UUT0
      Related
      ENSDARP00000026420.6, ENSDART00000019770.8
      Conserved Domains (1) summary
      pfam01275
      Location:23258
      Myelin_PLP; Myelin proteolipid protein (PLP or lipophilin)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      28959723..29045423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394488.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      46711..130313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)