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    mlf2 myeloid leukemia factor 2 [ Danio rerio (zebrafish) ]

    Gene ID: 561675, updated on 2-Nov-2024

    Summary

    Official Symbol
    mlf2provided by ZNC
    Official Full Name
    myeloid leukemia factor 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050913-67
    See related
    Ensembl:ENSDARG00000034616 AllianceGenome:ZFIN:ZDB-GENE-050913-67
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj39f09; wu:fj39f09; zgc:114097
    Summary
    Predicted to be involved in regulation of DNA-templated transcription. Predicted to be active in cytoplasm and nucleus. Orthologous to human MLF2 (myeloid leukemia factor 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See mlf2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (31827502..31836739)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (31871914..31881151)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene wingless-type MMTV integration site family, member 4b Neighboring gene cell division cycle 42, like Neighboring gene atrophin 1 Neighboring gene uncharacterized LOC110437989

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC114097

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025516.1NP_001020687.1  myeloid leukemia factor 2

      See identical proteins and their annotated locations for NP_001020687.1

      Status: PROVISIONAL

      Source sequence(s)
      BC097157
      UniProtKB/TrEMBL
      A8KBJ7, F6NMK5, Q4V8X5
      Related
      ENSDARP00000045209.6, ENSDART00000045210.7
      Conserved Domains (1) summary
      pfam10248
      Location:26192
      Mlf1IP; Myelodysplasia-myeloid leukemia factor 1-interacting protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      31827502..31836739
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394963.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      90985..100184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)