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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029617.2 RefSeqGene
- Range
-
5000..45300
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001003715.4 → NP_001003715.1 ATP-dependent DNA helicase Q5 isoform 2
See identical proteins and their annotated locations for NP_001003715.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), also known as RecQ5-gamma, differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AB042825, AC087749, AI537883, AI684041, AK075084, BP272369, N53539
- Consensus CDS
-
CCDS32735.1
- UniProtKB/TrEMBL
-
B3KQK2
- Related
- ENSP00000341983.5, ENST00000340830.9
- Conserved Domains (3) summary
-
- smart00487
Location:22 → 229
- DEXDc; DEAD-like helicases superfamily
- cd00079
Location:246 → 362
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- pfam00270
Location:31 → 201
- DEAD; DEAD/DEAH box helicase
-
NM_001003716.4 → NP_001003716.1 ATP-dependent DNA helicase Q5 isoform 3
See identical proteins and their annotated locations for NP_001003716.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3), also known as RecQ5-alpha, differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (3) is shorter at the C-terminus compared to isoform 1.
- Source sequence(s)
-
AB042823, AC087749, AI537883
- Consensus CDS
-
CCDS45777.1
- UniProtKB/TrEMBL
-
B3KQK2
- Related
- ENSP00000414933.2, ENST00000420326.6
- Conserved Domains (3) summary
-
- smart00487
Location:22 → 229
- DEXDc; DEAD-like helicases superfamily
- cd00079
Location:246 → 362
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- pfam00270
Location:31 → 201
- DEAD; DEAD/DEAH box helicase
-
NM_004259.7 → NP_004250.4 ATP-dependent DNA helicase Q5 isoform 1
See identical proteins and their annotated locations for NP_004250.4
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is also known as RecQ5-beta; it encodes the longest isoform (1).
- Source sequence(s)
-
AC087749
- Consensus CDS
-
CCDS42380.1
- UniProtKB/Swiss-Prot
- O94762, Q6P4G0, Q9H0B1, Q9P1W7, Q9UNC8
- UniProtKB/TrEMBL
-
A5YM55
- Related
- ENSP00000317636.5, ENST00000317905.10
- Conserved Domains (5) summary
-
- smart00487
Location:22 → 229
- DEXDc; DEAD-like helicases superfamily
- cd00079
Location:246 → 362
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- pfam00270
Location:31 → 201
- DEAD; DEAD/DEAH box helicase
- pfam06959
Location:625 → 826
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam16124
Location:367 → 434
- RecQ_Zn_bind; RecQ zinc-binding
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
75626854..75667154 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005257818.5 → XP_005257875.1 ATP-dependent DNA helicase Q5 isoform X1
See identical proteins and their annotated locations for XP_005257875.1
- UniProtKB/TrEMBL
-
A5YM55
- Conserved Domains (5) summary
-
- smart00487
Location:22 → 229
- DEXDc; DEAD-like helicases superfamily
- cd00079
Location:246 → 362
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- pfam00270
Location:31 → 201
- DEAD; DEAD/DEAH box helicase
- pfam06959
Location:625 → 826
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam16124
Location:367 → 434
- RecQ_Zn_bind; RecQ zinc-binding
-
XM_047437085.1 → XP_047293041.1 ATP-dependent DNA helicase Q5 isoform X2
- UniProtKB/Swiss-Prot
- O94762, Q6P4G0, Q9H0B1, Q9P1W7, Q9UNC8
- UniProtKB/TrEMBL
-
A5YM55
-
XM_011525486.3 → XP_011523788.1 ATP-dependent DNA helicase Q5 isoform X11
- Conserved Domains (2) summary
-
- pfam06959
Location:114 → 315
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam08236
Location:423 → 462
- SRI; SRI (Set2 Rpb1 interacting) domain
-
XM_011525485.3 → XP_011523787.1 ATP-dependent DNA helicase Q5 isoform X6
- UniProtKB/TrEMBL
-
Q9BW80
- Conserved Domains (3) summary
-
- pfam06959
Location:225 → 426
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam08236
Location:534 → 573
- SRI; SRI (Set2 Rpb1 interacting) domain
- pfam16124
Location:6 → 34
- RecQ_Zn_bind; RecQ zinc-binding
-
XM_047437087.1 → XP_047293043.1 ATP-dependent DNA helicase Q5 isoform X3
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_047437089.1 → XP_047293045.1 ATP-dependent DNA helicase Q5 isoform X8
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_011525484.2 → XP_011523786.1 ATP-dependent DNA helicase Q5 isoform X4
- UniProtKB/TrEMBL
-
Q9BW80
- Conserved Domains (3) summary
-
- pfam06959
Location:231 → 432
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam08236
Location:540 → 579
- SRI; SRI (Set2 Rpb1 interacting) domain
- pfam16124
Location:16 → 40
- RecQ_Zn_bind; RecQ zinc-binding
-
XM_047437086.1 → XP_047293042.1 ATP-dependent DNA helicase Q5 isoform X3
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_005257822.5 → XP_005257879.1 ATP-dependent DNA helicase Q5 isoform X9
See identical proteins and their annotated locations for XP_005257879.1
- UniProtKB/TrEMBL
- Q8WYH5, Q9BW80
- Conserved Domains (3) summary
-
- pfam06959
Location:220 → 421
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam08236
Location:508 → 547
- SRI; SRI (Set2 Rpb1 interacting) domain
- pfam16124
Location:4 → 29
- RecQ_Zn_bind; RecQ zinc-binding
-
XM_047437090.1 → XP_047293046.1 ATP-dependent DNA helicase Q5 isoform X9
- UniProtKB/TrEMBL
- Q8WYH5, Q9BW80
-
XM_047437088.1 → XP_047293044.1 ATP-dependent DNA helicase Q5 isoform X5
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_006722186.2 → XP_006722249.1 ATP-dependent DNA helicase Q5 isoform X7
- UniProtKB/TrEMBL
-
Q9BW80
- Conserved Domains (3) summary
-
- pfam06959
Location:220 → 421
- RecQ5; RecQ helicase protein-like 5 (RecQ5)
- pfam08236
Location:529 → 568
- SRI; SRI (Set2 Rpb1 interacting) domain
- pfam16124
Location:4 → 29
- RecQ_Zn_bind; RecQ zinc-binding
-
XM_047437091.1 → XP_047293047.1 ATP-dependent DNA helicase Q5 isoform X10
- UniProtKB/TrEMBL
-
J3KTQ2
-
XM_047437092.1 → XP_047293048.1 ATP-dependent DNA helicase Q5 isoform X12
- UniProtKB/TrEMBL
-
B3KQK2
- Related
- ENSP00000462248.1, ENST00000584999.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
76520039..76560340 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054317822.1 → XP_054173797.1 ATP-dependent DNA helicase Q5 isoform X1
- UniProtKB/TrEMBL
-
A5YM55
-
XM_054317831.1 → XP_054173806.1 ATP-dependent DNA helicase Q5 isoform X11
-
XM_054317826.1 → XP_054173801.1 ATP-dependent DNA helicase Q5 isoform X6
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_054317828.1 → XP_054173803.1 ATP-dependent DNA helicase Q5 isoform X8
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_054317824.1 → XP_054173799.1 ATP-dependent DNA helicase Q5 isoform X4
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_054317825.1 → XP_054173800.1 ATP-dependent DNA helicase Q5 isoform X5
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_054317823.1 → XP_054173798.1 ATP-dependent DNA helicase Q5 isoform X3
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_054317829.1 → XP_054173804.1 ATP-dependent DNA helicase Q5 isoform X9
- UniProtKB/TrEMBL
- Q8WYH5, Q9BW80
-
XM_054317827.1 → XP_054173802.1 ATP-dependent DNA helicase Q5 isoform X7
- UniProtKB/TrEMBL
-
Q9BW80
-
XM_054317830.1 → XP_054173805.1 ATP-dependent DNA helicase Q5 isoform X10
- UniProtKB/TrEMBL
-
J3KTQ2