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    stard7 StAR related lipid transfer domain containing 7 [ Danio rerio (zebrafish) ]

    Gene ID: 564572, updated on 9-Dec-2024

    Summary

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    Official Symbol
    stard7provided by ZNC
    Official Full Name
    StAR related lipid transfer domain containing 7provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-2310
    See related
    Ensembl:ENSDARG00000074858 AllianceGenome:ZFIN:ZDB-GENE-030131-2310
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc04a02; wu:fc04a02; si:dkey-200l5.5
    Summary
    Predicted to enable lipid binding activity. Predicted to act upstream of or within lipid transport. Human ortholog(s) of this gene implicated in familial adult myoclonic epilepsy 2. Orthologous to human STARD7 (StAR related lipid transfer domain containing 7). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See stard7 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (17700015..17711304, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (17742581..17753892, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene developmentally regulated GTP binding protein 1 Neighboring gene microRNA 218b Neighboring gene solute carrier family 20 member 1b Neighboring gene si:dkey-200l5.4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    stAR-related lipid transfer protein 7, mitochondrial
    Names
    StAR-related lipid transfer (START) domain containing 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      17700015..17711304 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_687902.9 → XP_692994.3  stAR-related lipid transfer protein 7, mitochondrial

      UniProtKB/TrEMBL
      A0A8N7UVX5
      Related
      ENSDARP00000122941.1, ENSDART00000147553.2
      Conserved Domains (1) summary
      cd08911
      Location:175 → 362
      START_STARD7-like; Lipid-binding START domain of mammalian STARD7 and related proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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