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    S100A12 S100 calcium binding protein A12 [ Bos taurus (domestic cattle) ]

    Gene ID: 282467, updated on 4-Oct-2024

    Summary

    Official Symbol
    S100A12provided by VGNC
    Official Full Name
    S100 calcium binding protein A12provided by VGNC
    Primary source
    VGNC:VGNC:59189
    See related
    BGD:BT11315; Ensembl:ENSBTAG00000012638
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CAGC; CAAF1; CO-AG; EN-RAGE
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    Genomic context

    See S100A12 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (17102730..17104176)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene protein S100-A15A Neighboring gene S100 calcium binding protein A8 Neighboring gene uncharacterized LOC132344836 Neighboring gene S100 calcium binding protein A9

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    protein S100-A12
    Names
    RAGE-binding protein
    calcium-binding protein in amniotic fluid 1
    calgranulin-C
    cornea-associated antigen
    extracellular newly identified RAGE-binding protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174651.3NP_777076.1  protein S100-A12

      See identical proteins and their annotated locations for NP_777076.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102542
      UniProtKB/Swiss-Prot
      P79105, Q3T070, Q9TR16
      UniProtKB/TrEMBL
      B6VAP8
      Conserved Domains (1) summary
      cd05030
      Location:289
      calgranulins; Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      17102730..17104176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005203612.3XP_005203669.1  protein S100-A12 isoform X1

      See identical proteins and their annotated locations for XP_005203669.1

      UniProtKB/Swiss-Prot
      P79105, Q3T070, Q9TR16
      UniProtKB/TrEMBL
      B6VAP8
      Related
      ENSBTAP00000056088.3, ENSBTAT00000063314.3
      Conserved Domains (1) summary
      cd05030
      Location:289
      calgranulins; Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, ...