U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    fam83b family with sequence similarity 83 member B [ Danio rerio (zebrafish) ]

    Gene ID: 568458, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    fam83bprovided by ZNC
    Official Full Name
    family with sequence similarity 83 member Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7066
    See related
    Ensembl:ENSDARG00000078309 AllianceGenome:ZFIN:ZDB-GENE-030131-7066
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fk73a07
    Summary
    Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Predicted to be active in cytoplasm and membrane. Orthologous to human FAM83B (family with sequence similarity 83 member B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See fam83b in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (2074927..2112157, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (1943466..1981142, complement)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 Neighboring gene GDNF family receptor alpha like Neighboring gene hypocretin (orexin) receptor 2 Neighboring gene uncharacterized LOC137487352 Neighboring gene muscular LMNA-interacting protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A morpholino-based screen to identify novel genes involved in craniofacial morphogenesis. Melvin VS, et al. Dev Dyn, 2013 Jul. PMID 23559552, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein FAM83B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      2074927..2112157 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005170779.5 → XP_005170836.1  protein FAM83B

      See identical proteins and their annotated locations for XP_005170836.1

      UniProtKB/TrEMBL
      A0A8M2BI13, E7F4Q7
      Related
      ENSDARP00000154607.1, ENSDART00000189343.1
      Conserved Domains (2) summary
      cd09182
      Location:22 → 288
      PLDc_FAM83B_N; N-terminal phospholipase D-like domain of the uncharacterized protein, Family with sequence similarity 83B
      pfam13091
      Location:144 → 281
      PLDc_2; PLD-like domain

    2. XM_068212987.1 → XP_068069088.1  protein FAM83B

      UniProtKB/TrEMBL
      A0A8M2BI13, E7F4Q7
      Related
      ENSDARP00000099572.2, ENSDART00000110814.3
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.