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    timm13 translocase of inner mitochondrial membrane 13 homolog (yeast) [ Danio rerio (zebrafish) ]

    Gene ID: 436738, updated on 2-Nov-2024

    Summary

    Official Symbol
    timm13provided by ZNC
    Official Full Name
    translocase of inner mitochondrial membrane 13 homolog (yeast)provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-167
    See related
    Ensembl:ENSDARG00000058297 AllianceGenome:ZFIN:ZDB-GENE-040718-167
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fd44h11; zgc:92895; wu:fd44h11
    Summary
    Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Is expressed in several structures, including eye; immature eye; midbrain; myotome; and pectoral fin. Orthologous to human TIMM13 (translocase of inner mitochondrial membrane 13). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See timm13 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (10771114..10774749, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (10741432..10745067, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene SAS-6 centriolar assembly protein Neighboring gene transmembrane serine protease 9 Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene ectodermal-neural cortex 3 Neighboring gene rho/rac guanine nucleotide exchange factor (GEF) 18b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in protein insertion into mitochondrial inner membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial intermembrane space protein transporter complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    mitochondrial import inner membrane translocase subunit Tim13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002465.2NP_001002465.1  mitochondrial import inner membrane translocase subunit Tim13

      See identical proteins and their annotated locations for NP_001002465.1

      Status: VALIDATED

      Source sequence(s)
      BX908398, EH499699
      UniProtKB/Swiss-Prot
      Q6DGJ3
      UniProtKB/TrEMBL
      B2GSH6
      Related
      ENSDARP00000075599.5, ENSDART00000081156.6
      Conserved Domains (1) summary
      pfam02953
      Location:2484
      zf-Tim10_DDP; Tim10/DDP family zinc finger

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      10771114..10774749 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)