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    LOC4326139 piriformospora indica-insensitive protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326139, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4326139
    Gene description
    piriformospora indica-insensitive protein 2
    Locus tag
    OSNPB_010110800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4326139 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (581089..584169, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (576489..579621, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene proline-rich receptor-like protein kinase PERK8 Neighboring gene phosphoenolpyruvate carboxylase 4 Neighboring gene uncharacterized LOC136355592 Neighboring gene pectinesterase inhibitor 28-like Neighboring gene peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    piriformospora indica-insensitive protein 2
    Names
    Os01g0110800
    P0439B06.16
    putative disease resistance protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      581089..584169 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015779252.3 → XP_015634738.1  piriformospora indica-insensitive protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8J8Y834, B8ACV6, B9EYU9, Q0JRB4, Q657S8
      Conserved Domains (2) summary
      PLN00113
      Location:156 → 366
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:183 → 206
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_015779247.3 → XP_015634733.1  piriformospora indica-insensitive protein 2 isoform X1

      UniProtKB/TrEMBL
      B8ACV6
      Conserved Domains (2) summary
      PLN00113
      Location:156 → 393
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:158 → 182
      LRR_RI; leucine-rich repeat [structural motif]

    3. XM_015779257.3 → XP_015634743.1  piriformospora indica-insensitive protein 2 isoform X3

      Conserved Domains (3) summary
      cd00116
      Location:94 → 290
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:58 → 82
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:133 → 192
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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