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    LOC4344229 probable serine/threonine-protein kinase PBL7 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344229, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344229
    Gene description
    probable serine/threonine-protein kinase PBL7
    Locus tag
    OSNPB_070668900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4344229 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (28477866..28481372, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (28250046..28253691, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene lipase Neighboring gene BTB/POZ domain-containing protein At3g05675 Neighboring gene DNA polymerase zeta catalytic subunit Neighboring gene xylose isomerase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable serine/threonine-protein kinase PBL7
    Names
    Os07g0668900
    P0625E02.115
    putative protein serine/threonine kinase
    serine/threonine-protein kinase CDL1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      28477866..28481372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789158.3 → XP_015644644.1  probable serine/threonine-protein kinase PBL7 isoform X2

      UniProtKB/TrEMBL
      A2YPR5, A3BN84, Q0D3S6, Q8H3R0
      Conserved Domains (1) summary
      cd14066
      Location:85 → 352
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. XM_015789157.3 → XP_015644643.1  probable serine/threonine-protein kinase PBL7 isoform X1

      Conserved Domains (1) summary
      cd14066
      Location:85 → 353
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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