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    LOC4335044 ATG8-interacting protein 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4335044, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4335044
    Gene description
    ATG8-interacting protein 1
    Locus tag
    OSNPB_040165300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4335044 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (4529083..4533840)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (4436853..4441625)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene thaumatin-like protein 1b Neighboring gene protein SENSITIVE TO PROTON RHIZOTOXICITY 2 Neighboring gene uncharacterized LOC4335045 Neighboring gene uncharacterized LOC4335046

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATG8-interacting protein 1
    Names
    Os04g0165300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      4529083..4533840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015781340.3 → XP_015636826.1  ATG8-interacting protein 1

      UniProtKB/TrEMBL
      A0A0P0W725, I7H0M2, Q7XS62
    Nucleotide Protein
    Heading Accession and Version

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