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    LOC4327604 uncharacterized LOC4327604 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327604, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4327604
    Gene description
    uncharacterized LOC4327604
    Locus tag
    OSNPB_010819700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1529_G03.19
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    Genomic context

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    See LOC4327604 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (35568716..35571118)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (34943669..34946180)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2-17 kDa Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial Neighboring gene uncharacterized LOC4327606

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4327604
    Names
    Os01g0819700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      35568716..35571118
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770991.3 → XP_015626477.1  uncharacterized protein LOC4327604

      UniProtKB/TrEMBL
      A0A9K3Y796, B7EZT3, B9FR70, Q0JI72, Q8LQE9
      Conserved Domains (1) summary
      pfam11331
      Location:343 → 385
      zinc_ribbon_12; Probable zinc-ribbon domain
    Nucleotide Protein
    Heading Accession and Version

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