U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC4344362 uncharacterized LOC4344362 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344362, updated on 12-Jul-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC4344362
    Gene description
    uncharacterized LOC4344362
    Locus tag
    OSNPB_070689800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC4344362 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (29572638..29575213)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (29338370..29341155)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene nicotianamine synthase 3-like Neighboring gene uncharacterized LOC107281542 Neighboring gene BRCT domain-containing protein At4g02110-like Neighboring gene uncharacterized LOC4344364

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC4344362
    Names
    Os07g0689800
    P0597G07.116

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      29572638..29575213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790224.3 → XP_015645710.1  uncharacterized protein LOC4344362 isoform X1

      UniProtKB/TrEMBL
      A0A0N7KP36, B8B699, Q0D3F1, Q7F0I0
      Conserved Domains (2) summary
      smart00271
      Location:410 → 451
      DnaJ; DnaJ molecular chaperone homology domain
      sd00006
      Location:294 → 324
      TPR; TPR repeat [structural motif]

    2. XM_015790225.3 → XP_015645711.1  uncharacterized protein LOC4344362 isoform X2

      UniProtKB/TrEMBL
      B8B699
      Conserved Domains (2) summary
      smart00271
      Location:409 → 450
      DnaJ; DnaJ molecular chaperone homology domain
      sd00006
      Location:293 → 323
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials