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    LOC4323885 uncharacterized LOC4323885 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4323885, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4323885
    Gene description
    uncharacterized LOC4323885
    Locus tag
    OSNPB_010694300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4323885 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (29271934..29286968, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (28683877..28698914, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354944 Neighboring gene uncharacterized LOC4323884 Neighboring gene uncharacterized LOC136355748 Neighboring gene putative clathrin assembly protein At2g01600

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4323885
    Names
    Os01g0694300
    Os01g0694400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      29271934..29286968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015763720.3 → XP_015619206.1  uncharacterized protein LOC4323885 isoform X2

      UniProtKB/TrEMBL
      B9EYY5
      Conserved Domains (2) summary
      pfam11935
      Location:68 → 282
      DUF3453; Domain of unknown function (DUF3453)
      pfam12295
      Location:1052 → 1231
      Symplekin_C; Symplekin tight junction protein C terminal

    2. XM_015763719.3 → XP_015619205.1  uncharacterized protein LOC4323885 isoform X1

      UniProtKB/TrEMBL
      B9EYY5
      Conserved Domains (2) summary
      pfam11935
      Location:67 → 298
      DUF3453; Domain of unknown function (DUF3453)
      pfam12295
      Location:1053 → 1232
      Symplekin_C; Symplekin tight junction protein C terminal
    Nucleotide Protein
    Heading Accession and Version

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