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    LOC4325662 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325662, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325662
    Gene description
    protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
    Locus tag
    OSNPB_010186900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4325662 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (4657224..4659045)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (4646417..4648255)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4325661 Neighboring gene uncharacterized LOC107280580 Neighboring gene uncharacterized LOC4325663 Neighboring gene uncharacterized LOC4325665

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
    Names
    Os01g0186900
    P0512G09.2-1
    P0512G09.2-2
    P0695A04.11-1
    P0695A04.11-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      4657224..4659045
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766157.3 → XP_015621643.1  protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1

      UniProtKB/TrEMBL
      B7EXU7, Q5SNE7, Q5SNF5
      Conserved Domains (1) summary
      pfam13359
      Location:239 → 397
      DDE_Tnp_4; DDE superfamily endonuclease
    Nucleotide Protein
    Heading Accession and Version

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