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    LOC4349324 cortical cell-delineating protein [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349324, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349324
    Gene description
    cortical cell-delineating protein
    Locus tag
    OSNPB_100551800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    RCc2; RCg2
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    Genomic context

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    See LOC4349324 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (22350431..22351238, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (21658070..21658893, complement)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial Neighboring gene putative lipid-binding protein AIR1B Neighboring gene cortical cell-delineating protein Neighboring gene cortical cell-delineating protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a rice gene family encoding root-specific proteins. Xu Y, et al. Plant Mol Biol, 1995 Jan. PMID 7888615

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cortical cell-delineating protein
    Names
    Os10g0551800
    root-specific protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      22350431..22351238 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757899.3 → XP_015613385.1  cortical cell-delineating protein

      UniProtKB/TrEMBL
      Q0IVV1, Q42474, Q7XCD3
      Conserved Domains (1) summary
      cd01958
      Location:64 → 146
      HPS_like; Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members ...
    Nucleotide Protein
    Heading Accession and Version

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