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    LOC4331775 sucrose transport protein SUT1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331775, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4331775
    Gene description
    sucrose transport protein SUT1
    Locus tag
    OSNPB_030170900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    SUT1; OsSUT1
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    Genomic context

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    See LOC4331775 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (3808349..3814790, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (3797694..3804148, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein HOX21-like Neighboring gene uncharacterized protein At5g39865 Neighboring gene transcription factor ILI6-like Neighboring gene F-box/kelch-repeat protein At1g74510

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phloem loading in rice leaves depends strongly on the apoplastic pathway. Wang G, et al. J Exp Bot, 2021 May 4. PMID 33624763
    2. cDNA cloning and tissue specific expression of a gene for sucrose transporter from rice (Oryza sativa L.). Hirose T, et al. Plant Cell Physiol, 1997 Dec. PMID 9522469
    3. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
    4. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Phloem loading in rice leaves depends strongly on the apoplastic pathway.
      Title: Phloem loading in rice leaves depends strongly on the apoplastic pathway.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sucrose:proton symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sucrose transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sucrose transport protein SUT1
    Names
    LOC_Os03g07480
    OSJNBa0091P11.1
    Sucrose permease 1
    Sucrose transporter 1
    Sucrose-proton symporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402054.1 → NP_001388983.1  sucrose transport protein SUT1

      Status: VALIDATED

      Source sequence(s)
      CB657683, CB657684, CI150080, CI303744, D87819
      UniProtKB/Swiss-Prot
      A0A0P0VTV7, O49838, Q10R52, Q10R53, Q10R54, Q10R55, Q8S7X2, Q9LKH3

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      3808349..3814790 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015777687.3 → XP_015633173.1  sucrose transport protein SUT1 isoform X1

      UniProtKB/Swiss-Prot
      Q10R54
      Conserved Domains (1) summary
      TIGR01301
      Location:48 → 473
      GPH_sucrose; GPH family sucrose/H+ symporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q10R54.1 GenPept UniProtKB/Swiss-Prot:Q10R54

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