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    LOC4332103 peroxygenase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332103, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4332103
    Gene description
    peroxygenase
    Locus tag
    OSNPB_030222600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4332103 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (6465474..6468156)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (6417891..6420583)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355880 Neighboring gene uncharacterized LOC112938370 Neighboring gene small nucleolar RNA snoR111 Neighboring gene uncharacterized LOC136355860 Neighboring gene uncharacterized LOC9272246 Neighboring gene uncharacterized LOC107280448

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxygenase
    Names
    Os03g0222600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      6465474..6468156
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773566.3 → XP_015629052.1  peroxygenase isoform X1

      UniProtKB/TrEMBL
      A2XE22, B7FAF1, Q10PT1, Q8H813
      Conserved Domains (1) summary
      pfam05042
      Location:96 → 265
      Caleosin; Caleosin related protein

    2. XM_066309035.1 → XP_066165132.1  peroxygenase isoform X2

    Nucleotide Protein
    Heading Accession and Version

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