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    LOC4351010 tryptamine benzoyltransferase 2-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4351010, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4351010
    Gene description
    tryptamine benzoyltransferase 2-like
    Locus tag
    OSNPB_110643100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    TBT2; OsTBT2
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    Genomic context

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    See LOC4351010 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (27453929..27455512)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (25501569..25503149)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354080 Neighboring gene glutathione synthetase, chloroplastic Neighboring gene uncharacterized LOC107279408 Neighboring gene tryptamine benzoyltransferase 2-like Neighboring gene serine carboxypeptidase-like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionarily Distinct BAHD N-Acyltransferases Are Responsible for Natural Variation of Aromatic Amine Conjugates in Rice. Peng M, et al. Plant Cell, 2016 Jul. PMID 27354554, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tryptamine benzoyltransferase 2
    Names
    LOC_Os11g42370
    Os11g0643100
    Tryptamine benzoyltransferase 2
    agmatine coumaroyltransferase-1
    tryptamine benzoyl transferase
    NP_001410157.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423228.1 → NP_001410157.1  tryptamine benzoyltransferase 2

      Status: VALIDATED

      Source sequence(s)
      AK061327
      UniProtKB/Swiss-Prot
      Q2R0J4
      UniProtKB/TrEMBL
      A0A1L2EH65, B9G8H4

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      27453929..27455512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2R0J4.1 GenPept UniProtKB/Swiss-Prot:Q2R0J4

    Gene LinkOut

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