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    LOC4335793 protein S40-7 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4335793, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4335793
    Gene description
    protein S40-7
    Locus tag
    OSNPB_040413900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4335793 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (20827569..20828818)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (20443235..20444631)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS11y Neighboring gene transfer RNA leucine (anticodon UAG) Neighboring gene mitochondrial fission protein ELM1 Neighboring gene OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein S40-7
    Names
    Os04g0413900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      20827569..20828818
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778251.3 → XP_015633737.1  protein S40-7

      UniProtKB/TrEMBL
      A0A0P0WAI1, A2XT85, Q01IS5, Q0JDC3, Q7XVJ5
      Conserved Domains (1) summary
      pfam04520
      Location:36 → 245
      Senescence_reg; Senescence regulator
    Nucleotide Protein
    Heading Accession and Version

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