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    LOC4325859 salicylic acid-binding protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325859, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325859
    Gene description
    salicylic acid-binding protein 2
    Locus tag
    OSNPB_010787600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4325859 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (34015812..34021838)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (33409596..33415577)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene peroxidase 56 Neighboring gene uncharacterized LOC4325858 Neighboring gene uncharacterized LOC136354688 Neighboring gene uncharacterized LOC136355494

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methyl indole-3-acetate esterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methyl jasmonate esterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methyl salicylate esterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in jasmonic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in salicylic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    salicylic acid-binding protein 2
    Names
    Os01g0787600
    P0415A04.28-1
    putative ethylene-induced esterase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      34015812..34021838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015777184.2 → XP_015632670.1  salicylic acid-binding protein 2

      UniProtKB/TrEMBL
      A0A0N7KDV9, Q8S125
      Conserved Domains (2) summary
      pfam00561
      Location:43 → 282
      Abhydrolase_1; alpha/beta hydrolase fold
      cl21494
      Location:44 → 285
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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