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    LOC4329616 U-box domain-containing protein 25 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329616, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4329616
    Gene description
    U-box domain-containing protein 25
    Locus tag
    OSNPB_020548700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (21066811..21068375, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (20588126..20589701, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355018 Neighboring gene uncharacterized LOC107280093 Neighboring gene uncharacterized LOC112937886 Neighboring gene uncharacterized LOC107279937 Neighboring gene uncharacterized LOC4329617

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    U-box domain-containing protein 25
    Names
    OSJNBa0040I22.4
    OSJNBa0051E21.40
    Os02g0548700
    putative U-box domain-containing protein
    putative immediate-early fungal elicitor protein CMPG1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      21066811..21068375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015768198.3 → XP_015623684.1  U-box domain-containing protein 25

      UniProtKB/TrEMBL
      A0A0P0VK58, Q0E0I9, Q6YYF8
      Conserved Domains (1) summary
      smart00504
      Location:21 → 85
      Ubox; Modified RING finger domain
    Nucleotide Protein
    Heading Accession and Version

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