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    LOC4331094 kinesin-like protein KIN-10A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331094, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4331094
    Gene description
    kinesin-like protein KIN-10A
    Locus tag
    OSNPB_020810200
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    STD1; KIN10A; OsJ_08815; OJ1116_E04.2; OJ1112_G06.36
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    Genomic context

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    See LOC4331094 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35128702..35133220)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (34632094..34636617)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene phosphate transporter PHO1-2-like Neighboring gene KIN14B-interacting protein At4g14310 Neighboring gene uncharacterized LOC107276732 Neighboring gene ABC transporter I family member 19 Neighboring gene uncharacterized LOC136355484

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of kinesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinesin-like protein KIN-10A
    Names
    LOC_Os02g56540
    Os02g0810200
    kinesin-like protein KIF11
    kinesin-related protein
    putative phragmoplast-associated kinesin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417042.1 → NP_001403971.1  kinesin-like protein KIN-10A

      Status: VALIDATED

      Source sequence(s)
      AK059635, AP014958
      UniProtKB/Swiss-Prot
      A3ACI9, Q0DWK6, Q6K990
      UniProtKB/TrEMBL
      A0A1L2C1C5

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      35128702..35133220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6K990.1 GenPept UniProtKB/Swiss-Prot:Q6K990

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials