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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001033962.2 → NP_001029134.1 ubiquitin-protein ligase E3A isoform 3
See identical proteins and their annotated locations for NP_001029134.1
Status: VALIDATED
- Source sequence(s)
-
AC167971, AK029133, AK220549, BC094605, CJ125878
- Consensus CDS
-
CCDS80733.1
- UniProtKB/TrEMBL
-
Q5DTH1
- Related
- ENSMUSP00000103161.3, ENSMUST00000107537.5
- Conserved Domains (2) summary
-
- cd00078
Location:497 → 847
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:6 → 60
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393666.1 → NP_001380595.1 ubiquitin-protein ligase E3A isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/Swiss-Prot
- E9QKT1, O08759, P97482, Q8CE29
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:518 → 868
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:27 → 81
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393668.1 → NP_001380597.1 ubiquitin-protein ligase E3A isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:497 → 847
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:6 → 60
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393669.1 → NP_001380598.1 ubiquitin-protein ligase E3A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:506 → 856
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:15 → 69
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393670.1 → NP_001380599.1 ubiquitin-protein ligase E3A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:506 → 856
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:15 → 69
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393671.1 → NP_001380600.1 ubiquitin-protein ligase E3A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:506 → 856
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:15 → 69
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393672.1 → NP_001380601.1 ubiquitin-protein ligase E3A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:506 → 856
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:15 → 69
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_001393973.1 → NP_001380902.1 ubiquitin-protein ligase E3A isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/Swiss-Prot
- E9QKT1, O08759, P97482, Q8CE29
- UniProtKB/TrEMBL
-
Q5DTH1
-
NM_011668.3 → NP_035798.2 ubiquitin-protein ligase E3A isoform 2
See identical proteins and their annotated locations for NP_035798.2
Status: VALIDATED
- Source sequence(s)
-
AC167971, AK029133, AK220549, BC094605, CD352481, CJ125878
- Consensus CDS
-
CCDS39973.1
- UniProtKB/Swiss-Prot
- E9QKT1, O08759, P97482, Q8CE29
- UniProtKB/TrEMBL
-
Q5DTH1
- Related
- ENSMUSP00000143859.2, ENSMUST00000200758.4
- Conserved Domains (2) summary
-
- cd00078
Location:518 → 868
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:27 → 81
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
-
NM_173010.4 → NP_766598.1 ubiquitin-protein ligase E3A isoform 1
See identical proteins and their annotated locations for NP_766598.1
Status: VALIDATED
- Source sequence(s)
-
AC167971
- UniProtKB/TrEMBL
-
Q5DTH1
- Related
- ENSMUSP00000143962.2, ENSMUST00000202945.4
- Conserved Domains (2) summary
-
- cd00078
Location:497 → 762
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:6 → 60
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
58871891..58960585
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030242374.2 → XP_030098234.1 ubiquitin-protein ligase E3A isoform X4
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (1) summary
-
- cd00078
Location:458 → 808
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
-
XM_030242375.1 → XP_030098235.1 ubiquitin-protein ligase E3A isoform X4
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (1) summary
-
- cd00078
Location:458 → 808
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
-
XM_030242373.1 → XP_030098233.1 ubiquitin-protein ligase E3A isoform X4
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (1) summary
-
- cd00078
Location:458 → 808
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
-
XM_030242372.2 → XP_030098232.1 ubiquitin-protein ligase E3A isoform X3
- UniProtKB/TrEMBL
-
Q5DTH1
- Conserved Domains (2) summary
-
- cd00078
Location:497 → 847
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam16558
Location:6 → 60
- AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001393667.1: Suppressed sequence
- Description
- NM_001393667.1: This RefSeq was removed because it was made for testing purposes.