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    Cypt4 cysteine-rich perinuclear theca 4 [ Mus musculus (house mouse) ]

    Gene ID: 235067, updated on 28-Oct-2024

    Summary

    Official Symbol
    Cypt4provided by MGI
    Official Full Name
    cysteine-rich perinuclear theca 4provided by MGI
    Primary source
    MGI:MGI:1916573
    See related
    Ensembl:ENSMUSG00000047995 AllianceGenome:MGI:1916573
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ckt1r2; 1700009B20Rik
    Summary
    Located in nucleus. [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

    See Cypt4 in Genome Data Viewer
    Location:
    9 A4; 9 10.25 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (24536481..24537124)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (24625185..24625828)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 10701 Neighboring gene predicted gene, 22380 Neighboring gene dpy-19 like C-mannosyltransferase 1 Neighboring gene predicted gene, 57533 Neighboring gene STARR-seq mESC enhancer starr_23585 Neighboring gene dpy-19 like 2 Neighboring gene STARR-seq mESC enhancer starr_23586 Neighboring gene STARR-seq mESC enhancer starr_23587 Neighboring gene STARR-seq mESC enhancer starr_23588 Neighboring gene T-box 20 Neighboring gene predicted gene, 29824

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    cysteine-rich perinuclear theca 4
    Names
    basic protein CKT1R2
    cysteine-rich perinuclear theca protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173412.2NP_775588.2  cysteine-rich perinuclear theca 4

      See identical proteins and their annotated locations for NP_775588.2

      Status: VALIDATED

      Source sequence(s)
      AC154463, BC060952, BX638772
      Consensus CDS
      CCDS22932.1
      UniProtKB/TrEMBL
      Q6P925, Q8CH21
      Related
      ENSMUSP00000054958.7, ENSMUST00000053956.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      24536481..24537124
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)