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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001146258.2 → NP_001139730.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform a
See identical proteins and their annotated locations for NP_001139730.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR compared to variant 1. Both variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AC022506, KF459552
- Consensus CDS
-
CCDS8946.1
- UniProtKB/Swiss-Prot
- B2RDL3, B4DM11, B4DY44, Q8TBX8, Q9H6N2
- UniProtKB/TrEMBL
-
B3KWP7
- Related
- ENSP00000439878.2, ENST00000540759.6
- Conserved Domains (1) summary
-
- smart00330
Location:72 → 420
- PIPKc; Phosphatidylinositol phosphate kinases
-
NM_001146259.2 → NP_001139731.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform b
See identical proteins and their annotated locations for NP_001139731.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses two alternate in-frame splice sites in the 5' coding region compared to variant 1. This results in a shorter protein (isoform b) compared to isoform a.
- Source sequence(s)
-
AC022506, KF459552
- Consensus CDS
-
CCDS55839.1
- UniProtKB/TrEMBL
-
B3KWP7
- Related
- ENSP00000447390.1, ENST00000550465.5
- Conserved Domains (1) summary
-
- smart00330
Location:72 → 402
- PIPKc; Phosphatidylinositol phosphate kinases
-
NM_001146260.2 → NP_001139732.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform c
See identical proteins and their annotated locations for NP_001139732.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an in-frame exon in the 5' coding region codon compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AC022506, KF459552
- Consensus CDS
-
CCDS53808.1
- UniProtKB/TrEMBL
-
B3KWP7
- Related
- ENSP00000412035.3, ENST00000422156.7
- Conserved Domains (1) summary
-
- smart00330
Location:72 → 372
- PIPKc; Phosphatidylinositol phosphate kinases
-
NM_024779.5 → NP_079055.3 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform a
See identical proteins and their annotated locations for NP_079055.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Both variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AC022506, KF459552
- Consensus CDS
-
CCDS8946.1
- UniProtKB/Swiss-Prot
- B2RDL3, B4DM11, B4DY44, Q8TBX8, Q9H6N2
- UniProtKB/TrEMBL
-
B3KWP7
- Related
- ENSP00000347032.5, ENST00000354947.10
- Conserved Domains (1) summary
-
- smart00330
Location:72 → 420
- PIPKc; Phosphatidylinositol phosphate kinases
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
57591192..57603418
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005269152.4 → XP_005269209.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1
- UniProtKB/TrEMBL
-
B3KWP7
- Conserved Domains (1) summary
-
- smart00330
Location:72 → 407
- PIPKc; Phosphatidylinositol phosphate kinases
-
XM_011538747.3 → XP_011537049.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X4
- UniProtKB/TrEMBL
- B3KQV3, E7ERY6
- Conserved Domains (1) summary
-
- cl02572
Location:45 → 230
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
-
XM_047429551.1 → XP_047285507.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X2
- UniProtKB/TrEMBL
-
B3KWP7
-
XM_047429552.1 → XP_047285508.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
57559429..57571638
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054373244.1 → XP_054229219.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1
- UniProtKB/TrEMBL
-
B3KWP7
-
XM_054373247.1 → XP_054229222.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X4
- UniProtKB/TrEMBL
- B3KQV3, E7ERY6
-
XM_054373245.1 → XP_054229220.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X2
- UniProtKB/TrEMBL
-
B3KWP7
-
XM_054373246.1 → XP_054229221.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X3