NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001371533.1 → NP_001358462.1 alpha-(1,6)-fucosyltransferase isoform a
Status: REVIEWED
- Source sequence(s)
-
AB049740, AF052088, AL109847, AL161871, DB089189, Y17978
- Consensus CDS
-
CCDS9775.1
- UniProtKB/Swiss-Prot
- B4DFS7, G3V5N0, O00235, Q8IUA5, Q9BYC5, Q9BYC6, Q9P2U5, Q9P2U6
- UniProtKB/TrEMBL
- A8K8P8, Q546E0
- Related
- ENSP00000501213.1, ENST00000673929.1
- Conserved Domains (3) summary
-
- cd11300
Location:174 → 499
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:506 → 560
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
- COG0013
Location:50 → 152
- AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001371534.1 → NP_001358463.1 alpha-(1,6)-fucosyltransferase isoform a
Status: REVIEWED
- Source sequence(s)
-
AL109847, AL161871, AL355840, AL359236
- Consensus CDS
-
CCDS9775.1
- UniProtKB/Swiss-Prot
- B4DFS7, G3V5N0, O00235, Q8IUA5, Q9BYC5, Q9BYC6, Q9P2U5, Q9P2U6
- UniProtKB/TrEMBL
- A8K8P8, Q546E0
- Conserved Domains (3) summary
-
- cd11300
Location:174 → 499
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:506 → 560
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
- COG0013
Location:50 → 152
- AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001371536.1 → NP_001358465.1 alpha-(1,6)-fucosyltransferase isoform c
Status: REVIEWED
- Source sequence(s)
-
AL109847, AL161871, AL355840, AL359236
- UniProtKB/TrEMBL
-
A8K8P8
- Conserved Domains (3) summary
-
- cd11300
Location:208 → 533
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:540 → 594
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
- COG0013
Location:50 → 179
- AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_004480.4 → NP_004471.4 alpha-(1,6)-fucosyltransferase isoform b
See identical proteins and their annotated locations for NP_004471.4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks a portion of the 5' UTR and 5' coding region, and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AJ536056, AK294242, AL109847, AL359236, BX107537
- Consensus CDS
-
CCDS9776.2
- UniProtKB/TrEMBL
-
G3XAD2
- Related
- ENSP00000452433.1, ENST00000557164.5
- Conserved Domains (2) summary
-
- cd11300
Location:11 → 336
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:343 → 397
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
-
NM_178155.3 → NP_835368.1 alpha-(1,6)-fucosyltransferase isoform a
See identical proteins and their annotated locations for NP_835368.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as B6) represents the longest transcript and encodes the longer isoform (a). Variants 1 and 3 encode the same isoform.
- Source sequence(s)
-
AJ536053, AK292413, AL109847, AL359236, BX107537
- Consensus CDS
-
CCDS9775.1
- UniProtKB/Swiss-Prot
- B4DFS7, G3V5N0, O00235, Q8IUA5, Q9BYC5, Q9BYC6, Q9P2U5, Q9P2U6
- UniProtKB/TrEMBL
- A8K8P8, Q546E0
- Related
- ENSP00000353910.5, ENST00000360689.9
- Conserved Domains (3) summary
-
- cd11300
Location:174 → 499
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:506 → 560
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
- COG0013
Location:50 → 152
- AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_178156.2 → NP_835369.1 alpha-(1,6)-fucosyltransferase isoform a
See identical proteins and their annotated locations for NP_835369.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3, also known as B5) differs in the 5' UTR compared to variant 1. Variants 1 and 3 encode the same isoform (a).
- Source sequence(s)
-
AJ536055, AJ536056, AL109847, AL161871, AL359236, BX107537
- Consensus CDS
-
CCDS9775.1
- UniProtKB/Swiss-Prot
- B4DFS7, G3V5N0, O00235, Q8IUA5, Q9BYC5, Q9BYC6, Q9P2U5, Q9P2U6
- UniProtKB/TrEMBL
- A8K8P8, Q546E0
- Related
- ENSP00000378087.2, ENST00000394586.6
- Conserved Domains (3) summary
-
- cd11300
Location:174 → 499
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:506 → 560
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
- COG0013
Location:50 → 152
- AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
RNA
-
NR_038167.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two consecutive exons in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ536056, AL109847, AL161871, AL359236, BC142958, BX107537
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
65356842..65744121
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047431179.1 → XP_047287135.1 alpha-(1,6)-fucosyltransferase isoform X1
-
XM_047431177.1 → XP_047287133.1 alpha-(1,6)-fucosyltransferase isoform X1
-
XM_047431181.1 → XP_047287137.1 alpha-(1,6)-fucosyltransferase isoform X2
- UniProtKB/Swiss-Prot
- B4DFS7, G3V5N0, O00235, Q8IUA5, Q9BYC5, Q9BYC6, Q9P2U5, Q9P2U6
- UniProtKB/TrEMBL
-
Q546E0
-
XM_017021138.2 → XP_016876627.1 alpha-(1,6)-fucosyltransferase isoform X1
- UniProtKB/TrEMBL
-
A8K8P8
- Conserved Domains (3) summary
-
- cd11300
Location:208 → 533
- Fut8_like; Alpha 1-6-fucosyltransferase
- cd11792
Location:540 → 594
- SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
- COG0013
Location:50 → 179
- AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
XM_047431178.1 → XP_047287134.1 alpha-(1,6)-fucosyltransferase isoform X1
-
XM_047431180.1 → XP_047287136.1 alpha-(1,6)-fucosyltransferase isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
59615360..59948716
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054375734.1 → XP_054231709.1 alpha-(1,6)-fucosyltransferase isoform X1
-
XM_054375733.1 → XP_054231708.1 alpha-(1,6)-fucosyltransferase isoform X1
-
XM_054375736.1 → XP_054231711.1 alpha-(1,6)-fucosyltransferase isoform X2
- UniProtKB/Swiss-Prot
- B4DFS7, G3V5N0, O00235, Q8IUA5, Q9BYC5, Q9BYC6, Q9P2U5, Q9P2U6
- UniProtKB/TrEMBL
-
Q546E0
-
XM_054375735.1 → XP_054231710.1 alpha-(1,6)-fucosyltransferase isoform X1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_178154.1: Suppressed sequence
- Description
- NM_178154.1: This RefSeq was permanently suppressed because the transcript is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_178157.1: Suppressed sequence
- Description
- NM_178157.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.