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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_002000.4 → NP_001991.1 immunoglobulin alpha Fc receptor isoform a precursor
See identical proteins and their annotated locations for NP_001991.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as a.1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AC245128, AK290922, BC027953
- Consensus CDS
-
CCDS12907.1
- UniProtKB/Swiss-Prot
- P24071, Q13603, Q13604, Q15727, Q15728, Q1AJL7, Q1AJL8, Q1AJL9, Q53X38, Q53X39, Q92587, Q92588, Q92590, Q92592, Q92593, Q9UEK0
- UniProtKB/TrEMBL
-
A0A0G2JLU6
- Related
- ENSP00000347714.3, ENST00000355524.8
- Conserved Domains (2) summary
-
- cd05711
Location:125 → 215
- Ig2_LILR_KIR_like; Second immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors, natural and similar domains
- cd05751
Location:27 → 120
- Ig1_LILR_KIR_like; First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILRs), Natural killer inhibitory receptors (KIRs) and similar domains
-
NM_133269.4 → NP_579803.1 immunoglobulin alpha Fc receptor isoform b precursor
See identical proteins and their annotated locations for NP_579803.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as a.2, delta66EC2, or U06) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, U43774
- Consensus CDS
-
CCDS42622.1
- UniProtKB/TrEMBL
-
A0A0G2JPZ4
- Related
- ENSP00000375605.3, ENST00000391725.7
- Conserved Domains (1) summary
-
- cl11960
Location:125 → 197
- Ig; Immunoglobulin domain
-
NM_133271.4 → NP_579805.1 immunoglobulin alpha Fc receptor isoform c precursor
See identical proteins and their annotated locations for NP_579805.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3, also known as a.3, Rla2, deltaE2, or U08) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, S82919
- Consensus CDS
-
CCDS12908.1
- UniProtKB/TrEMBL
-
A0A0G2JPP7
- Related
- ENSP00000338257.4, ENST00000345937.8
- Conserved Domains (1) summary
-
- cl11960
Location:27 → 120
- Ig; Immunoglobulin domain
-
NM_133272.4 → NP_579806.1 immunoglobulin alpha Fc receptor isoform d
See identical proteins and their annotated locations for NP_579806.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4, also known as deltaS2 or U11) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, D87855
- Consensus CDS
-
CCDS12909.1
- UniProtKB/TrEMBL
-
A0A0G2JNH4
- Related
- ENSP00000352218.4, ENST00000359272.8
- Conserved Domains (2) summary
-
- cd05711
Location:113 → 203
- Ig_FcalphaRI; Immunoglobulin (IG)-like domain of of FcalphaRI
- cl11960
Location:15 → 108
- Ig; Immunoglobulin domain
-
NM_133273.4 → NP_579807.1 immunoglobulin alpha Fc receptor isoform e
See identical proteins and their annotated locations for NP_579807.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5, also known as U10) lacks alternate in-frame exons in the 5' and 3' coding region, compared to variant 1. The encoded isoform (e) is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, BC027953, BX643574
- Consensus CDS
-
CCDS42624.1
- UniProtKB/TrEMBL
-
A0A0G2JPP7
- Related
- ENSP00000375606.3, ENST00000391726.7
- Conserved Domains (1) summary
-
- cl11960
Location:15 → 108
- Ig; Immunoglobulin domain
-
NM_133274.4 → NP_579808.1 immunoglobulin alpha Fc receptor isoform f
See identical proteins and their annotated locations for NP_579808.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6, also known as U09) lacks an in-frame exon in the 5' coding region and uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (f) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, D87857
- Consensus CDS
-
CCDS42625.1
- UniProtKB/TrEMBL
-
A0A0G2JP11
- Related
- ENSP00000375603.3, ENST00000391723.7
- Conserved Domains (1) summary
-
- cl11960
Location:113 → 180
- Ig; Immunoglobulin domain
-
NM_133277.4 → NP_579811.1 immunoglobulin alpha Fc receptor isoform g
See identical proteins and their annotated locations for NP_579811.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7, also known as deltaS2ECl or L10) lacks two in-frame exons in the 5' coding region, compared to variant 1. The encoded isoform (g) is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, D87861
- Consensus CDS
-
CCDS12910.1
- UniProtKB/Swiss-Prot
-
P24071
- Related
- ENSP00000338058.4, ENST00000353758.8
- Conserved Domains (1) summary
-
- cd05711
Location:16 → 106
- Ig_FcalphaRI; Immunoglobulin (IG)-like domain of of FcalphaRI
-
NM_133278.4 → NP_579812.1 immunoglobulin alpha Fc receptor isoform h
See identical proteins and their annotated locations for NP_579812.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (8, also known as deltaS266Ec2 or U13) lacks an in-frame exon in the 5' coding region and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (h) is shorter than isoform a.
- Source sequence(s)
-
AC245128, AK290922, X92559
- Consensus CDS
-
CCDS42623.1
- UniProtKB/TrEMBL
-
A0A0G2JM27
- Related
- ENSP00000375604.3, ENST00000391724.3
- Conserved Domains (1) summary
-
- cl11960
Location:113 → 185
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
54874235..54891420
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047438406.1 → XP_047294362.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_011526625.4 → XP_011524927.1 immunoglobulin alpha Fc receptor isoform X1
See identical proteins and their annotated locations for XP_011524927.1
- UniProtKB/TrEMBL
-
A0A0G2JNH4
- Conserved Domains (2) summary
-
- cd05711
Location:98 → 188
- Ig_FcalphaRI; Immunoglobulin (IG)-like domain of of FcalphaRI
- cl11960
Location:2 → 93
- Ig; Immunoglobulin domain
-
XM_047438407.1 → XP_047294363.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_017026474.2 → XP_016881963.1 immunoglobulin alpha Fc receptor isoform X1
- UniProtKB/TrEMBL
-
A0A0G2JNH4
- Conserved Domains (2) summary
-
- cd05711
Location:98 → 188
- Ig_FcalphaRI; Immunoglobulin (IG)-like domain of of FcalphaRI
- cl11960
Location:2 → 93
- Ig; Immunoglobulin domain
Reference GRCh38.p14 PATCHES
Genomic
-
NW_016107304.1 Reference GRCh38.p14 PATCHES
- Range
-
203308..220493
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054332039.1 → XP_054188014.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054332038.1 → XP_054188013.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054332040.1 → XP_054188015.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054332041.1 → XP_054188016.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 PATCHES
Genomic
-
NW_016107312.1 Reference GRCh38.p14 PATCHES
- Range
-
20566..37751 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054332051.1 → XP_054188026.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054332050.1 → XP_054188025.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054332052.1 → XP_054188027.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_2
Genomic
-
NW_003571055.2 Reference GRCh38.p14 ALT_REF_LOCI_2
- Range
-
519503..536649
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054330151.1 → XP_054186126.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054330152.1 → XP_054186127.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054330154.1 → XP_054186129.1 immunoglobulin alpha Fc receptor isoform X2
- UniProtKB/TrEMBL
-
A0A1P8A760
-
XM_054330153.1 → XP_054186128.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054330155.1 → XP_054186130.1 immunoglobulin alpha Fc receptor isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_7
Genomic
-
NW_003571060.1 Reference GRCh38.p14 ALT_REF_LOCI_7
- Range
-
778610..795785
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054331498.1 → XP_054187473.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054331497.1 → XP_054187472.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054331499.1 → XP_054187474.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054331500.1 → XP_054187475.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_9
Genomic
-
NT_187693.1 Reference GRCh38.p14 ALT_REF_LOCI_9
- Range
-
856805..873900
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333635.1 → XP_054189610.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333636.1 → XP_054189611.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333638.1 → XP_054189613.1 immunoglobulin alpha Fc receptor isoform X4
- UniProtKB/TrEMBL
-
A0A1P8A760
-
XM_054333637.1 → XP_054189612.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_23
Genomic
-
NT_187671.1 Reference GRCh38.p14 ALT_REF_LOCI_23
- Range
-
153182..170367
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333459.1 → XP_054189434.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333458.1 → XP_054189433.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333460.1 → XP_054189435.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333461.1 → XP_054189436.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_26
Genomic
-
NT_187674.1 Reference GRCh38.p14 ALT_REF_LOCI_26
- Range
-
160255..177440
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333465.1 → XP_054189440.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333464.1 → XP_054189439.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333466.1 → XP_054189441.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333467.1 → XP_054189442.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_27
Genomic
-
NT_187675.1 Reference GRCh38.p14 ALT_REF_LOCI_27
- Range
-
244474..261659
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333471.1 → XP_054189446.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333470.1 → XP_054189445.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333472.1 → XP_054189447.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333473.1 → XP_054189448.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_28
Genomic
-
NT_187676.1 Reference GRCh38.p14 ALT_REF_LOCI_28
- Range
-
150185..167370
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333479.1 → XP_054189454.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333478.1 → XP_054189453.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333480.1 → XP_054189455.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333481.1 → XP_054189456.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_29
Genomic
-
NT_187677.1 Reference GRCh38.p14 ALT_REF_LOCI_29
- Range
-
151602..168787
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333485.1 → XP_054189460.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333484.1 → XP_054189459.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333486.1 → XP_054189461.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333487.1 → XP_054189462.1 immunoglobulin alpha Fc receptor isoform X1
Reference GRCh38.p14 ALT_REF_LOCI_30
Genomic
-
NT_187683.1 Reference GRCh38.p14 ALT_REF_LOCI_30
- Range
-
148453..165638
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333491.1 → XP_054189466.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333490.1 → XP_054189465.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333492.1 → XP_054189467.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054333493.1 → XP_054189468.1 immunoglobulin alpha Fc receptor isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
57968550..57985728
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054320195.1 → XP_054176170.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054320194.1 → XP_054176169.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054320196.1 → XP_054176171.1 immunoglobulin alpha Fc receptor isoform X1
-
XM_054320197.1 → XP_054176172.1 immunoglobulin alpha Fc receptor isoform X1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_133279.2: Suppressed sequence
- Description
- NM_133279.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
-
NM_133280.1: Suppressed sequence
- Description
- NM_133280.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.