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    ccndbp1 cyclin D-type binding-protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 553373, updated on 2-Nov-2024

    Summary

    Official Symbol
    ccndbp1provided by ZNC
    Official Full Name
    cyclin D-type binding-protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070410-17
    See related
    Ensembl:ENSDARG00000039328 AllianceGenome:ZFIN:ZDB-GENE-070410-17
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ZHM; zgc:162082
    Summary
    Predicted to act upstream of or within regulation of cell cycle. Located in cytoplasm. Is expressed in hepatocyte; intestine; kidney; liver; and testis. Orthologous to human CCNDBP1 (cyclin D1 binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See ccndbp1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (60042884..60051671, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (60049351..60054349, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene SLAIN motif family, member 1b Neighboring gene transglutaminase 8 Neighboring gene prostate transmembrane protein, androgen induced 1 Neighboring gene phosphoenolpyruvate carboxykinase 1 (soluble) Neighboring gene PRELI domain containing 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cyclin-D1-binding protein 1 homolog
    Names
    GCIP
    maid
    zebrafish homolog of Maid

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089365.1NP_001082834.1  cyclin-D1-binding protein 1 homolog

      See identical proteins and their annotated locations for NP_001082834.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133859
      UniProtKB/Swiss-Prot
      A3KNI7, A8DS61, Q567K0
      Related
      ENSDARP00000057465.4, ENSDART00000057466.6
      Conserved Domains (1) summary
      pfam13324
      Location:49308
      GCIP; Grap2 and cyclin-D-interacting

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      60042884..60051671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068221725.1XP_068077826.1  cyclin-D1-binding protein 1 homolog isoform X1