Nudt16l2 nudix hydrolase 16 like 2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Nudt16l2provided by MGI
Official Full Name: nudix hydrolase 16 like 2provided by MGI
Primary source: MGI:MGI:1920782
See related: Ensembl:ENSMUSG00000032566 AllianceGenome:MGI:1920782
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Tseg8; 1700080E11Rik
Summary: Predicted to enable phosphodiesterase decapping endonuclease activity and snoRNA binding activity. Predicted to be involved in mRNA catabolic process and sno(s)RNA catabolic process. Predicted to be active in nucleus. Is expressed in testis. Orthologous to human NUDT16L2P (nudix hydrolase 16 like 2, pseudogene). [provided by Alliance of Genome Resources, Oct 2024]
Expression: Restricted expression toward testis adult (RPKM 106.7) See more
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: 9 F1; 9 56.61 cM

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	9	NC_000075.7 (105020543..105022281, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	9	NC_000075.6 (105143344..105145082, complement)

Chromosome 9 - NC_000075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

Go to the top of the page Help

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables phosphodiesterase decapping endonuclease activity	IBA Inferred from Biological aspect of Ancestor more info
enables snoRNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mRNA catabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in sno(s)RNA catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

Go to the top of the page Help

Preferred Names: U8 snoRNA-decapping enzyme-like

Names: nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 2; nudix motif 16-like; testis specific expressed protein 8

NP_082838.2

EC 3.6.1.62

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_028562.3 → NP_082838.2 U8 snoRNA-decapping enzyme-like

Status: VALIDATED

Source sequence(s)

AC161250

Consensus CDS

CCDS23463.1

UniProtKB/TrEMBL

C9W8M5, E9Q9G1

Related

ENSMUSP00000035180.4, ENSMUST00000035180.5

Conserved Domains (1) summary

cl00447
Location:54 → 94

Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...