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    Add3 adducin 3 [ Mus musculus (house mouse) ]

    Gene ID: 27360, updated on 28-Oct-2024

    Summary

    Official Symbol
    Add3provided by MGI
    Official Full Name
    adducin 3provided by MGI
    Primary source
    MGI:MGI:1351615
    See related
    Ensembl:ENSMUSG00000025026 AllianceGenome:MGI:1351615
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    A structural constituent of cytoskeleton. Predicted to be involved in positive regulation of vasoconstriction; regulation of cytoskeleton organization; and response to xenobiotic stimulus. Located in several cellular components, including brush border; condensed nuclear chromosome; and postsynaptic density. Is expressed in central nervous system; chondrocranium; gut; tail unsegmented mesenchyme; and vertebral axis musculature. Human ortholog(s) of this gene implicated in spastic quadriplegic cerebral palsy 3. Orthologous to human ADD3 (adducin 3). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Ubiquitous expression in bladder adult (RPKM 34.1), cerebellum adult (RPKM 18.5) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Add3 in Genome Data Viewer
    Location:
    19 D2; 19 47.18 cM
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (53128874..53235518)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (53140443..53247326)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30381 Neighboring gene STARR-positive B cell enhancer ABC_E7672 Neighboring gene STARR-positive B cell enhancer ABC_E782 Neighboring gene predicted gene 9618 Neighboring gene STARR-positive B cell enhancer mm9_chr19:53260109-53260409 Neighboring gene STARR-seq mESC enhancer starr_46440 Neighboring gene predicted gene, 52402 Neighboring gene RIKEN cDNA 1700001K23 gene Neighboring gene predicted gene, 36339

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (5)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase C binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase C binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables structural constituent of cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in barbed-end actin filament capping IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cytoskeleton organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to xenobiotic stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to xenobiotic stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in brush border IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell-cell junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in condensed nuclear chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic density IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in postsynaptic density IDA
    Inferred from Direct Assay
    more info
     

    General protein information

    Preferred Names
    gamma-adducin
    Names
    adducin 3 (gamma)
    adducin-like protein 70
    cytoskeletal protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164099.3NP_001157571.1  gamma-adducin isoform a

      See identical proteins and their annotated locations for NP_001157571.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (a). Variants 1, 2, and 5 encode the same isoform (a).
      Source sequence(s)
      AC138174
      Consensus CDS
      CCDS29900.1
      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Related
      ENSMUSP00000158149.2, ENSMUST00000237301.2
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    2. NM_001164100.3NP_001157572.1  gamma-adducin isoform b

      See identical proteins and their annotated locations for NP_001157572.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR and lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Both variants 3 and 4 encode the same isoform (b).
      Source sequence(s)
      AC138174
      Consensus CDS
      CCDS50467.1
      UniProtKB/TrEMBL
      Q3UNK1, Q8BJH2
      Related
      ENSMUSP00000052245.8, ENSMUST00000050096.15
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    3. NM_001164101.3NP_001157573.1  gamma-adducin isoform b

      See identical proteins and their annotated locations for NP_001157573.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Both variants 3 and 4 encode the same isoform (b).
      Source sequence(s)
      AC138174
      Consensus CDS
      CCDS50467.1
      UniProtKB/TrEMBL
      Q3UNK1, Q8BJH2
      Related
      ENSMUSP00000107370.4, ENSMUST00000111741.10
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    4. NM_001277100.2NP_001264029.1  gamma-adducin isoform a

      See identical proteins and their annotated locations for NP_001264029.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 5 encode the same isoform (a).
      Source sequence(s)
      AC138174
      Consensus CDS
      CCDS29900.1
      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Related
      ENSMUSP00000157955.2, ENSMUST00000237430.2
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    5. NM_001413986.1NP_001400915.1  gamma-adducin isoform a

      Status: VALIDATED

      Source sequence(s)
      AC138174
      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
    6. NM_001413987.1NP_001400916.1  gamma-adducin isoform b

      Status: VALIDATED

      Source sequence(s)
      AC138174
      UniProtKB/TrEMBL
      Q3UNK1
      Related
      ENSMUSP00000158154.2, ENSMUST00000238130.2
    7. NM_013758.5NP_038786.2  gamma-adducin isoform a

      See identical proteins and their annotated locations for NP_038786.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 5 encode the same isoform (a).
      Source sequence(s)
      AC138174, AK028481
      Consensus CDS
      CCDS29900.1
      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Related
      ENSMUSP00000025999.7, ENSMUST00000025999.7
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      53128874..53235518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030250961.2XP_030106821.1  gamma-adducin isoform X1

      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    2. XM_030250965.2XP_030106825.1  gamma-adducin isoform X1

      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    3. XM_030250963.2XP_030106823.1  gamma-adducin isoform X1

      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    4. XM_030250960.2XP_030106820.1  gamma-adducin isoform X1

      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    5. XM_030250959.2XP_030106819.1  gamma-adducin isoform X1

      UniProtKB/Swiss-Prot
      Q8JZT6, Q9D2M5, Q9QYB5, Q9QYB6
      UniProtKB/TrEMBL
      Q05C56
      Conserved Domains (1) summary
      cl00214
      Location:137385
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...