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    si:dkey-12l12.1 si:dkey-12l12.1 [ Danio rerio (zebrafish) ]

    Gene ID: 566480, updated on 28-Oct-2024

    Summary

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    Official Symbol
    si:dkey-12l12.1provided by ZNC
    Official Full Name
    si:dkey-12l12.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091204-232
    See related
    Ensembl:ENSDARG00000094422 AllianceGenome:ZFIN:ZDB-GENE-091204-232
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See si:dkey-12l12.1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (11334769..11346453)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (11194141..11206474)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene prolactin releasing hormone 2 Neighboring gene myosin VIIA and Rab interacting protein b Neighboring gene uncharacterized LOC137489212 Neighboring gene acyl-CoA dehydrogenase family, member 11 Neighboring gene atypical chemokine receptor 4b Neighboring gene PX domain containing 1b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein si:dkey-12l12.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      11334769..11346453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_701292.9 → XP_706384.2  uncharacterized protein si:dkey-12l12.1 isoform X1

      UniProtKB/TrEMBL
      A0A8M9PQY2
      Related
      ENSDARP00000114197.1, ENSDART00000147552.3

    2. XM_068217170.1 → XP_068073271.1  uncharacterized protein si:dkey-12l12.1 isoform X2

      Related
      ENSDARP00000117550.1, ENSDART00000143171.2

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395165.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      283906..295590
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021473748.2 → XP_021329423.1  uncharacterized protein si:dkey-12l12.1 isoform X1

      UniProtKB/TrEMBL
      A0A8M9PQY2

    2. XM_068219074.1 → XP_068075175.1  uncharacterized protein si:dkey-12l12.1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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