hddc2 HD domain containing 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: hddc2provided by ZNC
Official Full Name: HD domain containing 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-394
See related: Ensembl:ENSDARG00000034957 AllianceGenome:ZFIN:ZDB-GENE-050522-394
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb71h08; wu:fb71h08; zgc:112330
Summary: Predicted to enable 5'-deoxynucleotidase activity. Orthologous to human HDDC2 (HD domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (39685572..39689791)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (39782937..39787156)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fb71h08 (e-PCR)
- UniSTS:187398

fb71h08.x1 (e-PCR)
- UniSTS:203416

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables 5'-deoxynucleotidase activity	IBA Inferred from Biological aspect of Ancestor more info
enables 5'-deoxynucleotidase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: 5'-deoxynucleotidase HDDC2

Names: novel IBR domain containing protein

NP_001038696.1

EC 3.1.3.89

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.