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    LOC105371692 uncharacterized LOC105371692 [ Homo sapiens (human) ]

    Gene ID: 105371692, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105371692
    Gene description
    uncharacterized LOC105371692
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105371692 in Genome Data Viewer
    Location:
    1q32.1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (204564171..204629717)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (203828579..203892605)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene penta-EF-hand domain containing 1 pseudogene Neighboring gene MDM4 regulator of p53 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1729 Neighboring gene RNA, 5S ribosomal pseudogene 74 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204541896-204542596 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204547373-204547904 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204568422-204568952 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204568953-204569483 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204587827-204588686 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204588687-204589545 Neighboring gene leucine rich repeat neuronal 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204606107-204606644 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204606645-204607181 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:204616628-204617298 Neighboring gene uncharacterized LOC124904490 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204630451-204630952 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204632786-204633286 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204633287-204633787 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204647222-204647722 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204647723-204648223 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204661677-204662630 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204662631-204663582 Neighboring gene RNA, 5S ribosomal pseudogene 75

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. A germline-specific class of small RNAs binds mammalian Piwi proteins. Girard A, et al. Nature, 2006 Jul 13. PMID 16751776
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      204564171..204629717
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007066814.1 RNA Sequence

    2. XR_007066815.1 RNA Sequence

    3. XR_007066816.1 RNA Sequence

    4. XR_007066818.1 RNA Sequence

    5. XR_007066820.1 RNA Sequence

    6. XR_007066821.1 RNA Sequence

    7. XR_007066817.1 RNA Sequence

    8. XR_007066819.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      203828579..203892605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007070992.1 RNA Sequence

    2. XR_007070993.1 RNA Sequence

    3. XR_007070994.1 RNA Sequence

    4. XR_007070995.1 RNA Sequence

    5. XR_007070996.1 RNA Sequence

    6. XR_007070999.1 RNA Sequence

    7. XR_007070997.1 RNA Sequence

    8. XR_007071000.1 RNA Sequence

    9. XR_007070998.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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