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    LOC4331018 classical arabinogalactan protein 9 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331018, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4331018
    Gene description
    classical arabinogalactan protein 9
    Locus tag
    OSNPB_020797600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1004_E04.38
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    Genomic context

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    See LOC4331018 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (34449422..34450936)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (33953285..33954842)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene DNA replication licensing factor MCM5-like Neighboring gene aspartate aminotransferase, chloroplastic Neighboring gene transmembrane 9 superfamily member 11 Neighboring gene uncharacterized LOC9266501

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    classical arabinogalactan protein 9
    Names
    Os02g0797600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      34449422..34450936
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770996.2 → XP_015626482.1  classical arabinogalactan protein 9

      UniProtKB/TrEMBL
      A0A0P0VQP2, A2XAL1, Q6KAJ1
    Nucleotide Protein
    Heading Accession and Version

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