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    LOC9271235 uncharacterized LOC9271235 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9271235, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC9271235
    Gene description
    uncharacterized LOC9271235
    Locus tag
    OSNPB_070459200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9271235 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (16177695..16187319, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (16012869..16022640, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4343157 Neighboring gene protein ALP1-like Neighboring gene ultraviolet-B receptor UVR8 Neighboring gene F-box/FBD/LRR-repeat protein At1g13570-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC9271235
    Names
    OSJNBa0040K22.112-1
    Os07g0459200
    putative ubiquinone biosynthesis protein ubiB

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      16177695..16187319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066312596.1 → XP_066168693.1  uncharacterized protein LOC9271235 isoform X2

      UniProtKB/TrEMBL
      B8B5R5

    2. XM_015792401.3 → XP_015647887.1  uncharacterized protein LOC9271235 isoform X1

      UniProtKB/TrEMBL
      A0A0P0X629, B8B5R5, B9FX28, Q7EY94
      Conserved Domains (1) summary
      COG0661
      Location:138 → 605
      AarF; Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport and metabolism, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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