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    LOC9266462 DUF724 domain-containing protein 3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9266462, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC9266462
    Gene description
    DUF724 domain-containing protein 3
    Locus tag
    OSNPB_020204500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Ubiquitous expression in flowers (RPKM 3.4), flower buds (RPKM 3.3) and 6 other tissues See more
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    Genomic context

    See LOC9266462 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (5852552..5860689)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (5841769..5850448)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase CYP95 Neighboring gene (6-4)DNA photolyase Neighboring gene cytochrome P450 734A2-like Neighboring gene large ribosomal subunit protein bL19c

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General protein information

    Preferred Names
    DUF724 domain-containing protein 3; uncharacterized protein LOC9266462
    Names
    OSJNBb0056C19.4-1
    Os02g0204500
    P0544H11.20-1
    putative agenet domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      5852552..5860689
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066307904.1XP_066164001.1  uncharacterized protein LOC9266462 isoform X1

    2. XM_066307906.1XP_066164003.1  DUF724 domain-containing protein 3 isoform X2

    3. XM_066307905.1XP_066164002.1  uncharacterized protein LOC9266462 isoform X1

    4. XM_066307907.1XP_066164004.1  DUF724 domain-containing protein 3 isoform X2

    RNA

    1. XR_010739598.1 RNA Sequence

    2. XR_010739603.1 RNA Sequence

    3. XR_010739606.1 RNA Sequence

    4. XR_010739607.1 RNA Sequence

    5. XR_010739605.1 RNA Sequence

    6. XR_010739600.1 RNA Sequence

    7. XR_010739599.1 RNA Sequence

    8. XR_010739604.1 RNA Sequence

    9. XR_010739602.1 RNA Sequence

    10. XR_010739601.1 RNA Sequence

    11. XR_010739610.1 RNA Sequence

    12. XR_010739611.1 RNA Sequence

    13. XR_010739612.1 RNA Sequence

    14. XR_010739608.1 RNA Sequence

    15. XR_010739609.1 RNA Sequence