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    LOC4325861 pectinesterase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325861, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC4325861
    Gene description
    pectinesterase
    Locus tag
    OSNPB_010788400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

    See LOC4325861 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (34059666..34066422)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (33453415..33460087)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355494 Neighboring gene nuclear transport factor 2B Neighboring gene uncharacterized LOC136353472 Neighboring gene disease resistance protein RPS2 Neighboring gene early nodulin-like protein 9

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    pectinesterase
    Names
    Os01g0788400
    P0415A04.41
    putative pectin esterase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      34059666..34066422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015765656.3XP_015621142.1  pectinesterase

      UniProtKB/TrEMBL
      A0A0P0V939, A2WVV7, B9ETP3, Q5ZAW1
      Conserved Domains (1) summary
      PLN02301
      Location:1546
      PLN02301; pectinesterase/pectinesterase inhibitor