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    LOC4342034 protein SCARECROW 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342034, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4342034
    Gene description
    protein SCARECROW 1-like
    Locus tag
    OSNPB_060710900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4342034 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (30932734..30934003, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (30064045..30065831, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene benzyl alcohol O-benzoyltransferase Neighboring gene putative pentatricopeptide repeat-containing protein At5g36300 Neighboring gene uncharacterized LOC4342035 Neighboring gene uncharacterized LOC4342036

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein SCARECROW 1-like
    Names
    Os06g0710900
    P0655A07.31
    arp2/3 complex-activating protein rickA
    elongin BC and Polycomb repressive complex 2-associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      30932734..30934003 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015788916.3 → XP_015644402.3  protein SCARECROW 1-like

      UniProtKB/TrEMBL
      A2YGW4, A3BFA9, Q0D9L2, Q5Z9G1
    Nucleotide Protein
    Heading Accession and Version

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