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    LOC4349242 uncharacterized LOC4349242 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349242, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4349242
    Gene description
    uncharacterized LOC4349242
    Locus tag
    OSNPB_100537300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349242 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (21621814..21626795, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (20929618..20934621, complement)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene peroxidase 5 Neighboring gene putative B3 domain-containing protein Os10g0537100 Neighboring gene heavy metal-associated isoprenylated plant protein 30 Neighboring gene tobamovirus multiplication protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4349242
    Names
    Os10g0537300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      21621814..21626795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066304732.1 → XP_066160829.1  uncharacterized protein LOC4349242 isoform X5

      UniProtKB/TrEMBL
      A2Z9R4

    2. XM_066304731.1 → XP_066160828.1  uncharacterized protein LOC4349242 isoform X3

      UniProtKB/TrEMBL
      A2Z9R4

    3. XM_015758977.3 → XP_015614463.1  uncharacterized protein LOC4349242 isoform X4

      UniProtKB/TrEMBL
      A2Z9R4

    4. XM_015758976.3 → XP_015614462.1  uncharacterized protein LOC4349242 isoform X2

      UniProtKB/TrEMBL
      A2Z9R4, Q336X0

    5. XM_015758975.3 → XP_015614461.1  uncharacterized protein LOC4349242 isoform X1

      UniProtKB/TrEMBL
      A2Z9R4, Q0IW28, Q336W9
    Nucleotide Protein
    Heading Accession and Version

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