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    LOC4347872 uncharacterized protein At3g49055 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347872, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4347872
    Gene description
    uncharacterized protein At3g49055
    Locus tag
    OSNPB_090565400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4347872 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (26958665..26962365, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (22513523..22517196, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene 28 kDa ribonucleoprotein, chloroplastic Neighboring gene uncharacterized LOC9267512 Neighboring gene nuclear pore complex protein GP210 Neighboring gene delta(14)-sterol reductase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein At3g49055
    Names
    OSJNBa0042B15.33
    OSJNBa0070E11.7
    Os09g0565400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      26958665..26962365 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756125.2 → XP_015611611.1  uncharacterized protein At3g49055

      UniProtKB/TrEMBL
      B9G549, Q650W4, Q650X1
      Conserved Domains (1) summary
      TIGR02168
      Location:315 → 560
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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