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    LOC4351288 double-stranded RNA-binding protein 8-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4351288, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4351288
    Gene description
    double-stranded RNA-binding protein 8-like
    Locus tag
    OSNPB_120109900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    RBP; DRB1; DRB8; Odb1; OsDRB1
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    Genomic context

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    See LOC4351288 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (559715..564181, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (535869..540696, complement)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At4g13650-like Neighboring gene uncharacterized LOC4351287 Neighboring gene regulatory-associated protein of TOR 2 Neighboring gene uncharacterized LOC136354645

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonuclease III activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    double-stranded RNA-binding protein 8
    Names
    LOC_Os12g01916
    dsRNA binding protein RBP
    dsRNA-binding protein 1
    dsRNA-binding protein 8
    dsRNA-binding protein ODB1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001404614.1 → NP_001391543.1  double-stranded RNA-binding protein 8 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AK063972, AP014968

    2. NM_001404615.1 → NP_001391544.1  double-stranded RNA-binding protein 8 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK103543, AP014968, CI089586, CI138496
      UniProtKB/Swiss-Prot
      H2KX80, Q0IQN6, Q4ZH87, Q9LRF5

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      559715..564181 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0IQN6.1 GenPept UniProtKB/Swiss-Prot:Q0IQN6

    Gene LinkOut

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