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    LOC4335351 protein EIN6 ENHANCER [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4335351, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4335351
    Gene description
    protein EIN6 ENHANCER
    Locus tag
    OSNPB_040274400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4335351 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (11745422..11750448, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (11510767..11515839, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene crocetin glucosyltransferase 3 Neighboring gene alpha-L-arabinofuranosidase 1 Neighboring gene wall-associated receptor kinase 2 Neighboring gene uncharacterized LOC9268386

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein EIN6 ENHANCER
    Names
    Os04g0274400
    chromatin-remodeling complex subunit ies6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      11745422..11750448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778661.3 → XP_015634147.1  protein EIN6 ENHANCER

      UniProtKB/TrEMBL
      A0A0N7KIR4, B8ARL5, Q01HL8, Q7XWX1
      Conserved Domains (1) summary
      cl02154
      Location:26 → 124
      YL1_C; YL1 nuclear protein C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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