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    LOC4350877 uncharacterized LOC4350877 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4350877, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4350877
    Gene description
    uncharacterized LOC4350877
    Locus tag
    OSNPB_110604600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4350877 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (25241003..25244382)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (23291037..23294465)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene uncharacterized LOC4350876 Neighboring gene thioredoxin domain-containing protein PLP3A Neighboring gene uncharacterized LOC107279394

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4350877
    Names
    Os11g0604600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      25241003..25244382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015761003.3 → XP_015616489.1  uncharacterized protein LOC4350877

      UniProtKB/TrEMBL
      A0A8J8XXX2, A3CCQ8, B8BL98, Q0IRR2, Q2R1H8
      Conserved Domains (1) summary
      cd16495
      Location:38 → 86
      RING_CH-C4HC3_MARCH; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH proteins (MARCH)
    Nucleotide Protein
    Heading Accession and Version

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