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    LOC4330237 tripeptidyl-peptidase 2-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330237, updated on 3-Dec-2024

    Summary

    Gene symbol
    LOC4330237
    Gene description
    tripeptidyl-peptidase 2-like
    Locus tag
    OSNPB_020664300
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    TPP2; TPPII
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    Genomic context

    See LOC4330237 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (27439299..27456694)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (26952861..26970252)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene probable phospholipid hydroperoxide glutathione peroxidase Neighboring gene UDP-glucose:glycoprotein glucosyltransferase Neighboring gene uncharacterized LOC9272164 Neighboring gene uncharacterized LOC9267931

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables tripeptidyl-peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    tripeptidyl-peptidase 2
    Names
    LOC_Os02g44520
    P0461B08.4-1
    P0461B08.4-2
    Tripeptidyl-peptidase II
    putative tripeptidyl peptidase II
    NP_001403745.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001416816.1NP_001403745.1  tripeptidyl-peptidase 2

      Status: VALIDATED

      Source sequence(s)
      AK066478, AK067099, AK103515, CI308890, CI322886, CI576016, CI576733
      UniProtKB/Swiss-Prot
      A0A0P0VMN4, Q6ESI6, Q6ESI7
      UniProtKB/TrEMBL
      B8AGD0

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      27439299..27456694
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)