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    LOC4327469 ultraviolet-B receptor UVR8 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327469, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4327469
    Gene description
    ultraviolet-B receptor UVR8
    Locus tag
    OSNPB_010846800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0005H10.6
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    Genomic context

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    See LOC4327469 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (37004793..37010369)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (36379606..36385264)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene probable methyltransferase PMT11 Neighboring gene transcription initiation factor TFIID subunit 12b Neighboring gene uncharacterized LOC4327471

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ultraviolet-B receptor UVR8; uncharacterized protein LOC4327469
    Names
    Os01g0846800
    P0446B05.34
    UVB-resistance protein UVR8-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      37004793..37010369
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015762710.3 → XP_015618196.1  uncharacterized protein LOC4327469 isoform X1

      UniProtKB/TrEMBL
      B9EUE5
      Conserved Domains (2) summary
      pfam00415
      Location:402 → 453
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam13540
      Location:255 → 284
      RCC1_2; Regulator of chromosome condensation (RCC1) repeat

    2. XM_015762717.3 → XP_015618203.1  ultraviolet-B receptor UVR8 isoform X2

      UniProtKB/TrEMBL
      B9EUE5
      Conserved Domains (2) summary
      pfam00415
      Location:400 → 451
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam13540
      Location:255 → 282
      RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    Nucleotide Protein
    Heading Accession and Version

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