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    LOC4349853 putative disease resistance protein RGA3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349853, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349853
    Gene description
    putative disease resistance protein RGA3
    Locus tag
    OSNPB_110161100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349853 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (3025139..3031768)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (2978389..2983079)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene putative disease resistance protein RGA3 Neighboring gene disease resistance protein RGA2 Neighboring gene putative disease resistance protein RGA3 Neighboring gene disease resistance protein RGA2 Neighboring gene uncharacterized LOC112936887 Neighboring gene disease resistance protein RGA2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative disease resistance protein RGA3; uncharacterized protein LOC4349853
    Names
    Os11g0161100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      3025139..3031768
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066305149.1 → XP_066161246.1  uncharacterized protein LOC4349853 isoform X4

    2. XM_015761679.3 → XP_015617165.2  uncharacterized protein LOC4349853 isoform X3

    3. XM_015761680.3 → XP_015617166.1  uncharacterized protein LOC4349853 isoform X5

    4. XM_015761677.3 → XP_015617163.1  putative disease resistance protein RGA3 isoform X1

      UniProtKB/TrEMBL
      A3C8X2, Q0IUE9, Q2RA83
      Conserved Domains (1) summary
      pfam00931
      Location:233 → 425
      NB-ARC; NB-ARC domain

    5. XM_015761678.3 → XP_015617164.1  putative disease resistance protein RGA3 isoform X2

      UniProtKB/TrEMBL
      A3C8X2
      Conserved Domains (1) summary
      pfam00931
      Location:142 → 334
      NB-ARC; NB-ARC domain
    Nucleotide Protein
    Heading Accession and Version

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